Alright, so I just went out and was messing around with those wires. (they are soo beepbeepbeepbeep small and cramped in there they are impossible to work with).
While I was messing with them, I heard a fuse blow and more lights go out. I thought it got worse, but I replaced the fuse and now all my lights are working again!!
That black wire is still cut (next to #2), any idea what its for?